Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857518.1_cds_XP_016513449.1_25991
CDS Infomation

[gene=LOC107830419] [db_xref=GeneID:107830419] [protein=probable GTP diphosphokinase CRSH, chloroplastic] [protein_id=XP_016513449.1] [location=complement(join(70790..70918,71050..71334,71531..72466,73360..73734))] [gbkey=CDS]
Sequence

ATGGAACTCCACTTAAACGACTACACCCTCCATTTTATTAAAAAATCCACACACTTACAC
TTACCAAAATTCCCACACTGCCTTCGCCGGCGGAGTCCGAGCAAGATCGCCACCGTGCGA
GTTTCGGCGTCAGGTGAAGCACTGGTGGCGACGCCGGAACAGCCCGGCGGAAAAATGGTG
GTGGAATTAGTGGGTGCTTTTAATGAGCTAACTGAAAGAATGGATAATAAAGTTCTTTCA
ACTAGCTCTTCTAGATTGCTGTTCAAAGCTCTAAAGCTTTGTATTCCGATTCTTCAGTCG
TTGCCTCTTGCACCTGACGACCGTGAACCGCTCTCTAGAGCTTTGTCTGTAGCTGTTATT
TTAGCTGATCTACAGATGGATGCTGAAGTTATATCAACTGGGCTACTAAGAGAAGTTCTA
GAGGCAGGTGCTATATCAATATATGAGGTGAGGGATCGGATTGGTACAAGTACTGCTCAT
TTATTGCATGAAAGCTTGCGTGTGAAACATATGTCCTTAAAGGTAGAATTATTGGATGAT
GATAGTGCAACCGCATTAAGGAAATTTTGTCTGACCTACTATGATGTTAGGGCATTAGTA
TTAGACCTCGCTATCAAGCTTGATATGATGAGACACCTCGATTATCTTCCTAGGTACCGG
CAGCAGATGATATCACTTGAGGTTATGAAACTACATGCTCCGCTAGCACATGCCATCGGA
ACTAATTTGTTATCTCTTGAATTGGAGGATCTGTCTTTTCGATACTTGTTTCCTTACTCA
TATCTTTATCTTGATGCATGGTTGAGAAGTCACGAGAGTGGAAATAAGCCTCTGATAGAT
ATATGCAAGGAACAGCTGCTTCAGTCCCTAAAATCCGATCCACTATTAATGCAAATGGTG
AGCAAGATATCTGTTGAGGGTCGTTATAAAAGTCGTTACAGCACCATGAAGAAGCTCTTG
AAAGATGGTCGCAAGCTTGACGAGGTGAATGACATCTTAGGCTTAAGAGTTGTATTGACT
CCTCTCTCTGCTGGAGTAAATGAAATGGAAATTGGAGAAAAGGCTTGCTACAGGGCGCGA
GAAGTAGTCCTATCTTTGTGGAAAGAGATACCAAGTAGGTCAAAAGACTATATCTTAAGG
CCTAAGGCTAATGGATATAAGAGTTTGCACATGGCTGTTGATACCAGTGAACGTGACCGG
ACCAGACCGCTAATGGAAATTCAAATACGAACATCAGAGATGGACATACTGGCCGCTGGA
GGGACAGCATCCCATTCTTTGTACAAGGGTGGTGTTACCGATCCTGAAGAGGCGAGGCAT
CTGAAGGCAATCATGATGGCTGCAGCGGAGTTTGCAGCATTGCGTCTTAAAGATCTTCCT
TCGGGAAATCCCAAAGGTCTGGAAACTGACAAGAGAGGTAGGGTGTTCCGTCTTCTAGAC
AAGAATGGAGATGGTAAACTCAGCATTGACGAACTTATGGAAGTGATGGAGGAGCTCGGA
GCACCAGGAGATGATGCACGGGAGATGATGCAACTTCTCGATTCAAACAGTGATGGTTTT
CTGAGCTCGGATGAGTTTGATTTGTTTCAGGACCAGGTTGAATTCATCCGGAATTTAGAA
GATAGAGATGATCAATACAACACCCTGTTAAATAAAAAGCTGCAAATGGCAAATGAAACT
GGTTTGATTCAAGTGTACAGTAAAGAGCAAGGTGATACTTTGTAA

Peptide Sequence

PEP ID

XP_016513449.1
PEP Infomation

PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic [Nicotiana tabacum]
Sequence

MELHLNDYTLHFIKKSTHLHLPKFPHCLRRRSPSKIATVRVSASGEALVATPEQPGGKMV
VELVGAFNELTERMDNKVLSTSSSRLLFKALKLCIPILQSLPLAPDDREPLSRALSVAVI
LADLQMDAEVISTGLLREVLEAGAISIYEVRDRIGTSTAHLLHESLRVKHMSLKVELLDD
DSATALRKFCLTYYDVRALVLDLAIKLDMMRHLDYLPRYRQQMISLEVMKLHAPLAHAIG
TNLLSLELEDLSFRYLFPYSYLYLDAWLRSHESGNKPLIDICKEQLLQSLKSDPLLMQMV
SKISVEGRYKSRYSTMKKLLKDGRKLDEVNDILGLRVVLTPLSAGVNEMEIGEKACYRAR
EVVLSLWKEIPSRSKDYILRPKANGYKSLHMAVDTSERDRTRPLMEIQIRTSEMDILAAG
GTASHSLYKGGVTDPEEARHLKAIMMAAAEFAALRLKDLPSGNPKGLETDKRGRVFRLLD
KNGDGKLSIDELMEVMEELGAPGDDAREMMQLLDSNSDGFLSSDEFDLFQDQVEFIRNLE
DRDDQYNTLLNKKLQMANETGLIQVYSKEQGDTL

Transcript Sequence

Gene sequence data has not been registered.